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fix: prevent duplicate YAML keys in Hermes config (#3267)
* fix: prevent duplicate YAML keys in Hermes config Three changes in hermes_config.rs: 1. deduplicate_top_level_keys() - scan and remove duplicate top-level keys before YAML parsing, preventing "duplicate entry" parse errors 2. remove_all_sections() - helper to strip all occurrences of a given top-level key from raw YAML text 3. replace_yaml_section() now calls remove_all_sections() on the remainder after replacing the primary occurrence, preventing duplicate sections from accumulating on repeated writes Fixes the issue where mcp_servers (or any top-level key) gets duplicated in config.yaml, causing "Failed to parse Hermes config as YAML: duplicate entry with key" errors. Co-Authored-By: que3sui <204201112+que3sui@users.noreply.github.com> * fix: handle CRLF and LF line endings in top-level key deduplication is_top_level_key_line only accepted empty, space, or tab after the colon, but deduplicate_top_level_keys uses split_inclusive('\n'), so lines end with \n (LF) or \r\n (CRLF). Without accepting \r and \n as valid post-colon characters, the dedup safety net never activates. Add \r and \n checks to is_top_level_key_line, and three tests covering LF, CRLF, and first-occurrence preservation. Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com> * refactor(hermes): keep last occurrence when healing duplicate YAML keys Reworks the healing layers on top of the CRLF root-cause fix: - deduplicate_top_level_keys: keep the LAST occurrence of each duplicated key instead of the first. Duplicates come from section replacement degrading into appends (#3633), so the last block is the newest data -- and Hermes itself reads the config with PyYAML, whose duplicate-key semantics are last-wins. Keeping the first occurrence would silently roll users back to stale config and diverge from what Hermes runs with. Healthy files take a fast path and are returned untouched. - Drop the unused dup_key variable (fails cargo clippy -- -D warnings, which CI enforces). - replace_yaml_section: clean residual duplicate sections from the remainder via remove_all_sections; values come from the keep-last healed read, so dropping all stale on-disk copies loses nothing. - Add regression tests for the actual root cause (find/replace on CRLF input must replace in place, not append), keep-last semantics, identity on healthy files, end-to-end heal-then-parse, and duplicate cleanup on write. Fixes #3633 #2973 #2529 #3310 #3762 --------- Co-authored-by: que3sui <204201112+que3sui@users.noreply.github.com> Co-authored-by: Claude Opus 4.7 <noreply@anthropic.com> Co-authored-by: Jason <farion1231@gmail.com>
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@@ -116,10 +116,76 @@ pub fn read_hermes_config() -> Result<serde_yaml::Value, AppError> {
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return Ok(serde_yaml::Value::Mapping(serde_yaml::Mapping::new()));
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}
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serde_yaml::from_str(&content)
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// Heal duplicate top-level keys left behind by the pre-CRLF-fix append
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// bug (#3633); serde_yaml rejects them outright, which bricked the panel.
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let deduped = deduplicate_top_level_keys(&content);
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serde_yaml::from_str(&deduped)
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.map_err(|e| AppError::Config(format!("Failed to parse Hermes config as YAML: {e}")))
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}
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/// Remove duplicate top-level YAML sections, keeping the LAST occurrence of
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/// each key.
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///
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/// Keep-last is deliberate, not arbitrary: the duplicates come from section
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/// replacement degrading into appends (#3633), so the last block is the
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/// newest data — and Hermes itself reads the file with PyYAML, whose
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/// duplicate-key semantics are last-wins. Keeping the first occurrence would
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/// silently roll the user back to stale config and diverge from what Hermes
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/// actually runs with.
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fn deduplicate_top_level_keys(raw: &str) -> String {
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use std::collections::HashMap;
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// Pass 1: locate every top-level key line as (key, byte offset).
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let mut sections: Vec<(&str, usize)> = Vec::new();
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let mut offset = 0;
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for line in raw.split('\n') {
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if is_top_level_key_line(line) {
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if let Some(colon_pos) = line.find(':') {
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sections.push((&line[..colon_pos], offset));
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}
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}
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offset += line.len() + 1;
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}
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let mut remaining: HashMap<&str, usize> = HashMap::new();
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for (key, _) in §ions {
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*remaining.entry(key).or_insert(0) += 1;
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}
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if remaining.values().all(|&count| count <= 1) {
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return raw.to_string();
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}
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// Pass 2: re-emit, dropping every section that has a later occurrence of
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// the same key. A section spans from its key line to the next top-level
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// key line (or EOF), matching find_yaml_section_range. Content before the
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// first section (comments, document markers) is always kept.
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let mut result = String::with_capacity(raw.len());
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let head_end = sections
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.first()
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.map(|&(_, start)| start)
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.unwrap_or(raw.len());
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result.push_str(&raw[..head_end]);
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for (i, &(key, start)) in sections.iter().enumerate() {
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let end = sections
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.get(i + 1)
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.map(|&(_, next_start)| next_start)
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.unwrap_or(raw.len());
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let count = remaining.get_mut(key).expect("key collected in pass 1");
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*count -= 1;
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if *count > 0 {
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log::warn!(
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"Hermes config: dropped duplicate top-level section '{key}' (keeping the last occurrence)"
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);
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continue;
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}
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result.push_str(&raw[start..end]);
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}
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result
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}
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// ============================================================================
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// YAML Section-Level Replacement
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// ============================================================================
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@@ -132,6 +198,11 @@ pub fn read_hermes_config() -> Result<serde_yaml::Value, AppError> {
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/// - Not be a comment (starting with `#`)
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/// - Not be a sequence item (starting with `-`)
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/// - Contain `:` followed by space, tab, newline, or end-of-line
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///
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/// Lines may carry a trailing `\r` (CRLF files split on `\n`) or `\n`
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/// (callers using `split_inclusive`); both count as end-of-line after the
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/// colon. Rejecting `\r` here used to make every section lookup miss on
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/// CRLF configs, turning section replacement into endless appends (#3633).
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fn is_top_level_key_line(line: &str) -> bool {
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if line.is_empty() {
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return false;
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@@ -142,7 +213,7 @@ fn is_top_level_key_line(line: &str) -> bool {
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}
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if let Some(colon_pos) = line.find(':') {
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let after_colon = &line[colon_pos + 1..];
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after_colon.is_empty() || after_colon.starts_with(' ') || after_colon.starts_with('\t')
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after_colon.is_empty() || after_colon.starts_with([' ', '\t', '\r', '\n'])
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} else {
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false
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}
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@@ -196,6 +267,21 @@ fn serialize_yaml_section(key: &str, value: &serde_yaml::Value) -> Result<String
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Ok(yaml_str)
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}
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/// Remove every top-level section with the given key from raw YAML text.
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/// Used to clean residual duplicates of a key after replacing its first
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/// occurrence; safe values come from the keep-last healed read, so dropping
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/// all on-disk copies here loses nothing.
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fn remove_all_sections(raw: &str, section_key: &str) -> String {
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let mut result = String::with_capacity(raw.len());
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let mut rest = raw;
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while let Some((start, end)) = find_yaml_section_range(rest, section_key) {
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result.push_str(&rest[..start]);
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rest = &rest[end..];
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}
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result.push_str(rest);
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result
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}
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/// Replace a YAML section in raw text, or append it if not found.
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fn replace_yaml_section(
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raw: &str,
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@@ -208,12 +294,14 @@ fn replace_yaml_section(
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let mut result = String::with_capacity(raw.len());
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result.push_str(&raw[..start]);
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result.push_str(&serialized);
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// Drop duplicate sections of this key from the remainder — configs
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// written before the CRLF fix may carry several appended copies.
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let remainder = remove_all_sections(&raw[end..], section_key);
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// Ensure proper separation between sections
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let remainder = &raw[end..];
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if !serialized.ends_with('\n') && !remainder.is_empty() && !remainder.starts_with('\n') {
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result.push('\n');
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}
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result.push_str(remainder);
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result.push_str(&remainder);
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Ok(result)
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} else {
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// Section not found — append at end
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@@ -1204,6 +1292,111 @@ model:
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assert!(!section.starts_with("model_extra:"));
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}
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#[test]
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fn find_section_handles_crlf() {
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// Regression for #3633: CRLF line endings must not hide sections.
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let yaml = "model:\r\n default: gpt-4\r\nagent:\r\n max_turns: 10\r\n";
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let (start, end) = find_yaml_section_range(yaml, "model").unwrap();
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let section = &yaml[start..end];
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assert!(section.starts_with("model:"));
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assert!(section.contains("default: gpt-4"));
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assert!(!section.contains("agent:"));
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}
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// ---- deduplicate_top_level_keys tests ----
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#[test]
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fn dedup_keeps_last_occurrence() {
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// Duplicates come from replace-degraded-to-append, so the last block
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// is the newest data and must win (PyYAML last-wins, like Hermes).
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let yaml = "\
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model:
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default: gpt-4
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agent:
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max_turns: 10
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model:
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default: claude-opus-4-8
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";
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let result = deduplicate_top_level_keys(yaml);
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assert_eq!(
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result.lines().filter(|l| *l == "model:").count(),
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1,
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"duplicate model: section was not removed"
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);
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assert!(result.contains("claude-opus-4-8"));
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assert!(!result.contains("gpt-4"));
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assert!(result.contains("max_turns"));
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}
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#[test]
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fn dedup_handles_crlf() {
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let yaml = "model:\r\n default: gpt-4\r\nagent:\r\n max_turns: 10\r\nmodel:\r\n default: claude\r\n";
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let result = deduplicate_top_level_keys(yaml);
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assert_eq!(result.lines().filter(|l| l.trim() == "model:").count(), 1);
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assert!(result.contains("default: claude"));
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assert!(!result.contains("gpt-4"));
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}
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#[test]
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fn dedup_is_identity_without_duplicates() {
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let yaml = "\
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# Hermes config
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model:
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default: gpt-4
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agent:
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max_turns: 10
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";
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assert_eq!(deduplicate_top_level_keys(yaml), yaml);
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}
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#[test]
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fn dedup_result_parses_with_last_value() {
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// End-to-end: a config that serde_yaml rejects today must parse after
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// healing, and expose the newest (last) value.
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let yaml = "\
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custom_providers:
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- name: old-provider
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model:
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default: gpt-4
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custom_providers:
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- name: old-provider
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- name: new-provider
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";
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let healed = deduplicate_top_level_keys(yaml);
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let value: serde_yaml::Value = serde_yaml::from_str(&healed).unwrap();
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let providers = value
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.get("custom_providers")
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.unwrap()
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.as_sequence()
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.unwrap();
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assert_eq!(providers.len(), 2);
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assert_eq!(
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providers[1].get("name").unwrap().as_str().unwrap(),
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"new-provider"
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);
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}
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// ---- remove_all_sections tests ----
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#[test]
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fn remove_all_sections_strips_every_occurrence() {
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let yaml = "\
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model:
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default: gpt-4
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agent:
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max_turns: 10
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model:
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default: claude
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model:
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default: gemini
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";
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let result = remove_all_sections(yaml, "model");
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assert!(!result.contains("model:"));
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assert!(result.contains("agent:"));
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assert!(result.contains("max_turns"));
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}
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// ---- replace_yaml_section tests ----
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#[test]
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@@ -1239,6 +1432,62 @@ agent:
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assert!(!result.contains("openai"));
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}
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#[test]
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fn replace_section_in_crlf_config_replaces_in_place() {
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// Regression for #3633: on CRLF configs every "replace" used to
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// degrade into an append, piling up duplicate sections.
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let yaml = "model:\r\n default: gpt-4\r\nagent:\r\n max_turns: 10\r\n";
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let new_model = serde_yaml::Value::Mapping({
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let mut m = serde_yaml::Mapping::new();
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m.insert(
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serde_yaml::Value::String("default".to_string()),
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serde_yaml::Value::String("claude-opus-4-8".to_string()),
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);
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m
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});
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let result = replace_yaml_section(yaml, "model", &new_model).unwrap();
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assert_eq!(
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result.lines().filter(|l| l.trim() == "model:").count(),
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1,
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"model: must be replaced in place, not appended"
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);
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assert!(result.contains("claude-opus-4-8"));
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assert!(!result.contains("gpt-4"));
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assert!(result.contains("max_turns"));
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}
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#[test]
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fn replace_section_removes_residual_duplicates() {
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// A config already broken by the append bug: replacing the section
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// must also clean the stale duplicate copies after it.
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let yaml = "\
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model:
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default: gpt-4
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agent:
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max_turns: 10
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model:
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default: stale-copy
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";
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let new_model = serde_yaml::Value::Mapping({
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let mut m = serde_yaml::Mapping::new();
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m.insert(
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serde_yaml::Value::String("default".to_string()),
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serde_yaml::Value::String("claude-opus-4-8".to_string()),
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);
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m
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});
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let result = replace_yaml_section(yaml, "model", &new_model).unwrap();
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assert_eq!(result.lines().filter(|l| *l == "model:").count(), 1);
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assert!(result.contains("claude-opus-4-8"));
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assert!(!result.contains("stale-copy"));
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assert!(result.contains("agent:"));
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// The healed output must be valid YAML again
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let parsed: Result<serde_yaml::Value, _> = serde_yaml::from_str(&result);
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assert!(parsed.is_ok());
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}
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#[test]
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fn append_new_section() {
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let yaml = "\
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